{"id":2275,"date":"2023-03-04T00:25:22","date_gmt":"2023-03-04T06:25:22","guid":{"rendered":"http:\/\/jimlund.org\/blog\/?p=2275"},"modified":"2023-03-04T00:25:22","modified_gmt":"2023-03-04T06:25:22","slug":"covid-19-origins-again","status":"publish","type":"post","link":"https:\/\/jimlund.org\/blog\/?p=2275","title":{"rendered":"COVID-19 origins, again"},"content":{"rendered":"\n<p>With an announcement by the DOE, that they <a href=\"https:\/\/www.npr.org\/2023\/02\/28\/1160157977\/u-s-dept-of-energy-says-with-low-confidence-that-covid-may-have-leaked-from-a-la\">sorta think COVID-19 leaked from a lab<\/a>, the discussion is back on.  But there is no new evidence, just a mention of &#8216;intel&#8217;.  <\/p>\n\n\n\n<p>I am not an intelligence professional, but I have a few related<br> questions.  US intel on this could come from phone intercepts, emails<br> collected in real time or hacked out more recently, or from chatting<br> up Chinese virologists at conferences, etc., but this will give the US<br> at best a more limited view than the Chinese govt has.  No doubt there<br> were calls, emails, reports issued, panic and alarm as China became<br> aware of the outbreak and tried to contain it.  But how likely is it<br> that the Chinese govt or scientific officials knew the origins of<br> COVID-19 early on, or worked it out later on?  If Chinese officials<br> don&#8217;t know, an effective intelligence operation can&#8217;t extract an<br> answer.<\/p>\n\n\n\n<p>How could China know?  If one or more people at the Wuhan Institute of<br>\nVirology came down with COVID-19, passed it on to family and<br>\nacquaintances, and then COVID-19 spread more widely, they could track<br>\nthese connections.  Classic gumshoe epidemiology.  But that did not<br>\nhappen.<\/p>\n\n\n\n<p>Chinese doctors only became aware of a new disease in Dec 2019, health<br> officials jumped in by the end of Dec, and samples were collected from<br> Jan 2019 &#8211; March 2020 in the Wuhan market.  These samples and those<br> from early cases in the region have all been sequenced, published, and<br> shared.  This was close to the origin of the pandemic, and it is<br> unlikely China has any better information on what happened than the<br> rest of us have.  COVID-19 passing into humans much earlier and only<br> becoming pandemic in 2019 is ruled out by the analysis of COVID-19<br> sequences.<\/p>\n\n\n\n<p>The best guess at the origin of COVID-19 remains a couple of papers looking at the evidence, the epidemiological evidence of when and where early cases arose, and how it was transmitted, and the genomic evidence from sequencing of COVID-19 in early patients, and comparing these to each other to make a tree of early -&gt; later virus genomes, and to see how the early viral genomes in human patients differ from wild relatives and samples found in the Wuhan live animal market.  This sort of analysis can also provide estimates of time&#8211;how long the virus has been circulating in human hosts. (<a href=\"https:\/\/www.science.org\/doi\/10.1126\/science.abp8715\">ref1<\/a>, <a href=\"https:\/\/www.science.org\/doi\/10.1126\/science.abp8337\">ref2<\/a>, <a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S0092867421009910\">ref3<\/a>).  <\/p>\n","protected":false},"excerpt":{"rendered":"<p>With an announcement by the DOE, that they sorta think COVID-19 leaked from a lab, the discussion is back on. But there is no new evidence, just a mention of &#8216;intel&#8217;. I am not an intelligence professional, but I have a few related questions. US intel on this could come from phone intercepts, emails collected [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[1],"tags":[],"class_list":["post-2275","post","type-post","status-publish","format-standard","hentry","category-uncategorized"],"_links":{"self":[{"href":"https:\/\/jimlund.org\/blog\/index.php?rest_route=\/wp\/v2\/posts\/2275","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/jimlund.org\/blog\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/jimlund.org\/blog\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/jimlund.org\/blog\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/jimlund.org\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=2275"}],"version-history":[{"count":2,"href":"https:\/\/jimlund.org\/blog\/index.php?rest_route=\/wp\/v2\/posts\/2275\/revisions"}],"predecessor-version":[{"id":2277,"href":"https:\/\/jimlund.org\/blog\/index.php?rest_route=\/wp\/v2\/posts\/2275\/revisions\/2277"}],"wp:attachment":[{"href":"https:\/\/jimlund.org\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=2275"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/jimlund.org\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=2275"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/jimlund.org\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=2275"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}