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Archive for the ‘politics’ Category

Second domestic terrorist attack in two weeks

Wednesday, June 10th, 2009

Today the US had another domestic terrorist attack, the second in two weeks. This time, a long time right-winger, an anti-semite, white supremacist, and anti-Obama birther attacked the Holocaust Museum in DC. Like the guy last week, today’s shooter had a previous conviction for domestic terrorism.

I was listening to right-wing talker Sean Hannity and a listener called in and told a ‘joke’ that was basically death-wish for the Pres. and VP, wouldn’t it be great if they both died, ha ha. Hannity had a laugh along with the caller. I wonder when these right-wing talkers will stop encouraging the violent talk?

Documentation of US torture

Friday, April 17th, 2009

The ACLU went to court and forced the release of Office of Legal Council memos written under the Bush administration to provide legal cover for torture conducted by the CIA. The memos are here. The make for chilling reading, approving the use of medieval tortures on prisoners held by the US.

Republicans have embraced torture, and react with satisfaction and glee to the documentation of US torture. Most people find it appalling. A number of moderates find torture disgusting and are glad that the Obama administration has ordered it stopped but are dead set against prosecution of the torturers. For example, read Kevin Drum, Rob Farley, and Greg Laden. Newspaper editorial boards are split between torture advocates and moderates who oppose torture but also oppose prosecution of torturers. A few editorial writers are calling for what went on to be looked into and publicized–a truth and reconciliation type panel, but they are the rare wild-eyed ones.

The law here is clear. Torture is illegal under several US laws, for example:

TITLE 18 > PART I > CHAPTER 113C > § 2340
§ 2340. Definitions

As used in this chapter–
(1) “torture” means an act committed by a person acting undepecifically intended to inflict severe physical or mental pain or suffering (other than pain or suffering incidental to lawful sanctions) upon another person within his custody or physical control;
(2) “severe mental pain or suffering” means the prolonged mental harm resulting from–
(A) the intentional infliction or threatened infliction of severe physical pain or suffering;
(B) the administration or application, or threatened administration or application, of mind-altering substances or other procedures calculated to disrupt profoundly the senses or the personality;
(C) the threat of imminent death; or
(D) the threat that another person will imminently be subjected to death, severe physical pain or suffering, or the administration or application of mind-altering substances or other procedures calculated to disrupt profoundly the senses or personality; and
(3) “United States” means the several States of the United Sof Columbia, and the commonwealths, territories, and possessions of the United States.

And yet moderates argue that government agents who tortured prisoners were told that the OLC memos made it legal and protected the agents from prosecution, and that we must respect this.

As near as I can tell the moderates are making one or more of these arguments: 1) these government agents (CIA, etc.) can torture people because they the OLC memos make their actions legal, 2) that what US agents did to prisoners wasn’t torture, or that reasonable people could disagree over whether the prisoners were tortured, or 3) a combination of the two saying that the law was unclear on how much prisoners could legally be abused and the OLC memo clarifies the law and draws the line. The third argument is what the OLC normally does–interpret ambiguous or uncertain cases for the Executive.

I won’t touch argument one. The other two arguments often get combined–mostly three with a bit of two. The third argument, the ‘normal action of the OLC’ depends on two being true.

I would argue that you are reading the parsed legal language of the memos the wrong way. You read the parsed language, the detailed descriptions of the what is allowed and its limits, i.e. “For walling, a flexible false wall…” will be used and “the head and neck are supported with a rolled hood or towel” and think you are seeing the OLC clarifying ambigous law. This is not the case. What the OLC memo does is give aproval to a set maximal torture techniques, maximal under certain limits.

The torture techniques approved are protocols of torture limited to keep from killing the prisoners not to stay on right side of the law. The OLC is approving a torture regime that has been careful worked out by trial and error to inflict maximal pain, damage, and suffering without killing the prisoners or leaving obvious signs (broken bones, scars, death). The detailed protocol for beating prisoners (“walling”, slaps, grabs) was developed to keep from killing prisoners, not to prevent torturous treatment. Repeated knocking a man’s head against the wall will cause intracranial hemorrhage that kills a man and so a special beating protocol is necessary. It is surprisingly easy to kill a person by banging their head against a wall, the head is much more delicate than the limbs. Slapping and grabbing protocols are specified to prevent broken bones and also to prevent fatal contusions. A US Army report from a few years ago found dozens of homicides of detainees, many inadvertently beaten to death.

The OLC memo limits sleep deprivation to 11 days because that is the longest anyone is known to have survived under sleep deprivation. In experiments, rats have died after two weeks of sleep deprivation, it is not clear when it would kill people. So the OLC memo is endorsing maximal sleep deprivation. After two days, sleep deprivation causes progressively worse mental anguish and physical dehabilitation.

The stress positions endorsed by OLC are extremely painful and can cause permanent joint damage. Stress positions don’t leave scars and are rarely fatal, so they get OLC endorsement.

Previously released memos allow interogation up to the point of ‘major organ failure’. The typical result of ‘major organ failure’ is death of the patient. So the OLC was endorsing interogation up to but short of death.

The OLC memos approve a set of protocols designed cause extreme mental and physical anguish without killing the prisoners. The approved treatment includes many torture techniques of ancient origin, some notorious for their recent use against US soldiers in WWII, the Korean War, and the Vietnam War. The OLC wasn’t parsing ambiguous law so the ‘normal action of the OLC’ argument fails. As the government agents were using notorious torture techniques the argument that situation is ambiguous also fails. Realistically, can the people who carried this out and ignored the screams of their victims argue in court that this was not torture?

Dawkins ‘Weasel’ program as a Perl one-liner

Saturday, March 28th, 2009

Explained at Panda’s Thumb:

Over at uncommon descent William Dembski is musing over Richard Dawkins Weasel program. Why you may ask? Way back in prehistory (the 1980’s) Dawkins wrote a little BASIC program (in Apple BASIC of all things) to demonstrate the difference between random mutation and random mutation with selection, which many people were having trouble grasping. Now, this wasn’t a simulation of natural selection, and Dawkins was very careful to point this out.

But as a demonstration of selection versus simple random mutation, with the string “methinks it is a weasel” being selected in a matter of minutes, when simple random mutation would take longer than the age of the Universe, it was pretty stunning. As a result, creationists have been having conniption fits over this little program for decades. Such is its power, the Issac Newton of Information Theory, William Dembski, spent a not inconsiderable portion of his time attacking this toy program. In particular, he claimed that after every successful mutation, the successful mutation was locked into place, and couldn’t be reversed. But he was wrong, and it seems he just can’t admit it.

The Weasel program starts with a random string. Then each generation ‘offspring’ strings are generated, each with one letter randomly changed. From among the offspring, the string closest to the target string is chosen each generation. Rather quickly this process of mutation and selection will change any string into the target string. I start with “Creationism is nonsense” and my target is “methinks it is a weasle”, the target Dawkins uses.

Since the creationists are having trouble making such a program, I wondered *just how short* a program could be written to do this. Here’s a first attempt as a eight line Perl one-liner. It can be cut & pasted into a Unix terminal:

perl -e '$|=1;$s="Creationism is nonsense";$e="methinks it is a weasle";$try=11;$let=length($s);@e=split(//,$e);while($s ne $e){$i=-1;while($i++< $try){$new_s[$i]=$s;$chr=int(rand(27))||-64;substr($new_s[$i],int(rand($let)),1,chr(96+$chr));@spl=split(//,$new_s[$i]);$j=0;$new_sc[$i]=0;while($j<@e){$new_sc[$i]++if$e[$j]eq$spl[$j++]}}@sc=sort{$new_sc[$b]<=>$new_sc[$a]}(0..$#new_sc);@new=(shift@sc);while(@sc&&$new_sc[$sc[0]]==$new_sc[$new[0]]){push@new,shift@sc}$s=$new_s[$new[int(rand(@new))]];printf("Generation %5d, %-2dmismatches:  $sr",++$n,$let-$new_sc[$new[0]]);}print"n";'

(When I cut & paste the one liner on my Mac it changes the final single quote to an end quote and the last two pairs of double quotes to funny double quotes, so keep an eye out and change them back if you need to).

And the normal length 35 line program with comments:

#!/usr/bin/perl

$|=1;
$s="Creationism is nonsense";
$e="methinks it is a weasle";
$try=11; #New offspring per generation.

$let=length($s);
@e=split(//,$e);

while($s ne $e) {
  $i=-1;
  #Make $try new strings.
  while($i++< $try){
    $new_s[$i]=$s;

    #Mutate one char of the new string.
    $chr = int(rand(27)) || -64;
    substr($new_s[$i],int(rand($let)),1,chr(96+$chr));

    #Count the characters in the new string that match the target string.
    @spl=split(//,$new_s[$i]);
    $j=0;
    $new_sc[$i]=0;
    while($j<@e){$new_sc[$i]++ if $e[$j] eq $spl[$j++]}
  }

  #Find high scoring offspring strings.
  @sc = sort {$new_sc[$b]<=>$new_sc[$a]}(0..$#new_sc);

  @new=(shift @sc);
  while(@sc && $new_sc[$sc[0]] == $new_sc[$new[0]]){push @new,shift @sc}

  #Set new string to a random offspring strings from among the high scoring offspring.
  $s = $new_s[$new[int(rand(@new))]];

  printf("Generation %5d, %-2dmismatches:  $sr",++$n,$let-$new_sc[$new[0]]);
}
print"n";

President’s Council on Bioethics: dying of old age is good

Tuesday, January 20th, 2009

The President’s Council on Bioethics under President Bush put out a remarkable report, Beyond Therapy: Biotechnology and the Pursuit of Happiness. It’s worth noting this report before the Bush administration passes into history. Bush’s Bioethics chairman, Leon Kass, will no doubt continue pushing his ideas in other forums for years.

The report was written be the Council chaired by Leon Kass, a professional ‘bioethicist’, and the report makes quite odd assertions. It starts by explaining its motive; people would like to stay young longer and aging science has the potential to offer this in the next few decades:

Still, when properly examined, something like a desire for an “ageless body” seems in fact to be commonplace and deeply held; and should our capacities to retard the senescence of our bodies increase, that desire may well become more explicit and strong.

But Leon Kass sees this as a bioethical issue, and not a positive one, but instead thinks that living longer would be a bad thing. He wants to jump on the issue now to keep people from getting excited about the prospect. Yeah, it will be a hard sell.

The moral case for living longer is very strong, and the desire to live longer speaks powerfully to each and every one of us. But the full consequences of doing so may not be quite so obvious.

The report goes on to survey the ravages of aging and the prospects for reversing them and preventing this horrible toll of suffering and death. Then it begins making the moral case for the ravages of aging!

Being “used up” by our activities reinforces our sense of fully living in the world. Our dedication to our activities, our engagement with life’s callings, and our continuing interest in our projects all rely to some degree upon a sense that we are giving of ourselves, in a process destined to result in our complete expenditure. A life lived devoid of that sense, or so thoroughly removed from it as to be in practice devoid of it, might well be a life of lesser engagements and weakened commitments-a life other than the one that we have come to understand as fully human. This is not to say it will be worse-but it will very likely be quite different.

A far more distant horizon, a sense of essentially limitless time, might leave us less inclined to act with urgency. Why not leave for tomorrow what you might do today, if there are endless tomorrows before you?

But people in search of other more direct and immediate answers, or, more to the point, people whose longer lease on life leaves them relatively heedless of its finitude, might very well be far less welcoming of children, and far less interested in making the sacrifices needed to promote human renewal through the coming of new generations.

Would people in a world affected by age-retardation be more or less inclined to swear lifelong fidelity “until death do us part,” if their life expectancy at the time of marriage were eighty or a hundred more years, rather than, as today, fifty? And would intergenerational family ties be stronger or weaker if there were five or more generations alive at any one time?

The last question is easy to answer–people would have stronger ties to their family if they were able to meet more generations. Also, the quality of the relationships would be better–today people meet their grandparents and great-grandparents only as the elderly shadow of themselves, people who have lost the physical ability to pursue their interests and avocations, and people disengaging with family and the world.

The fact that we might die at any time could sting more if we were less attuned to the fact that we must die at some (more-or-less known) time. In an era of age-retardation, we might in practice therefore live under an even more powerful preoccupation with death, but one that leads us not to commitment, engagement, urgency, and renewal, but rather to anxiety, self-absorption, and preoccupation with any bodily mishap or every new anti-senescence measure.

But what if, in the “stretched rubber band” sort of life cycle, the period of debility became even more protracted and difficult than it now is? … And in the absence of fatal illnesses to end the misery, pressures for euthanasia and assisted suicide might mount.

But in considering the offer, we must take into account the value inherent in the human life cycle, in the process of aging, and in the knowledge we have of our mortality as we experience it. We should recognize that age-retardation may irreparably distort these and leave us living lives that, whatever else they might become, are in fundamental ways different from-and perhaps less serious or rich than-what we have to this point understood to be truly human.

The neediness of the very young and the very old puts roughly one generation at a time at the helm, and charges it with caring for those who are coming and those who are going. They are given the power to command the institutions of society, but with it the responsibility for the health and continuity of those institutions.

A society reshaped by age-retardation could certainly benefit from the wisdom and experience of more generations of older people, and from the peace, patience, and crucial encouragement that is often a wonderful gift of those who are no longer forging their identity or caught up in economic or social competition. But at the same time, generation after generation would reach and remain in their prime for many decades.xvii Sons might no longer surpass their fathers in vigor just as they prepared to become fathers themselves. The mature generation would have no obvious reason to make way for the next as the years passed, if its peak became a plateau. The succession of generations could be obstructed by a glut of the able. The old might think less of preparing their replacements, and the young could see before them only layers of their elders blocking the path, and no great reason to hurry in building families or careers-remaining functionally immature “young adults” for decades, neither willing nor able to step into the shoes of their mothers and fathers.

Disappointed hopes and broken dreams, accumulated mistakes and misfortunes, and the struggle to meet the economic and emotional demands of daily life can take their toll in diminished ambition, insensitivity, fatigue, and cynicism-not in everyone, to be sure, but in many people growing older.

Yes, the poor would hardly be happy to be poor forever, and the forces that damp the determination of the poor to change society–the ignorance and optimism of youth, the decline of the old–would be lessened. Ha. I think Leon Kass is lacking imagination here.

A society is greatly strengthened by the constant task of introducing itself to new generations of members, and might perhaps be weakened by the relative attenuation of that mission. A world that truly belonged to the living-who expected to exercise their ownership into an ever-expanding future-would be a very different, and perhaps a much diminished, world, focused too narrowly on maintaining life and not sufficiently broadly on building a good life.

And this concluding section is quite widdershins. The natural conclusions seem to be the opposite of the ones Kass seeks to draw:

A society reshaped in these and related ways would be a very different place to live than any we have known before. It could offer exciting new possibilities for personal fulfillment, and for the edifying accumulation of individual and societal experience and wisdom. But it might also be less accommodating of full human lives, less welcoming of new and uninitiated members, and less focused on the purposes that reach beyond survival

Conversely, in affirming the unfolding of birth and growth, aging and death, might we not find access to something permanent, something beyond this “drama of time,” something that at once transcends and gives purpose to the processes of the earth, lifting us to a dignity beyond all disorder, decay, and death?

Signs of progress

Tuesday, December 16th, 2008

Heard from a chorus of conservative pundits… “It’s a sign of progress in Iraq that Iraqi reporter Muntader al-Zaidi felt safe enough to throw a shoe at President Bush”. Or at least it will be if he survives the reported beatings and torture he is enduring.

Note to movie and TV writers: this would be an appropriate use of the word quantum, as in, “This is a sign of a quantum of progress in Iraq.”

Can your congressperson live on $169,300?

Monday, November 24th, 2008

In 2008, members of Congress were paid $169,300. Periodically stories surface about Congressional Reps sleeping in their offices or taking D.C. housing as a bribe (Minnesota Sen. Norm Coleman most recently). Atrios mentions it here.

So how much extra does it cost to be a Congressperson? They live away from home in D.C. when Congress is in session. They return to their district on weekends to be with their family or visit the district. They need to keep up appearances. Let’s make a list:

D.C. Apartment: $2,500/month
Clothes & dry cleaning: $1,500/month
Weekly flight home: $500/wk x 40
——————————————
Total: $68,000

So after accounting for the special expenses that come with the job, a Congressperson makes over $100k a year. Not a gold mine, but by itself almost double what the average family makes. And this is, I think, fairly conservative, as some of these expenses get picked up by campaign funds, and from the stories many Congresspeople have much cheaper D.C. digs, have a shared apartment, etc.

Notes from the 2008 election

Wednesday, November 5th, 2008

The national popular vote shifted +8% for the Democratic candidate compared to 2004 but some counties voted more Republican. I think we are seeing the most racist regions of the country, running in a belt across the Southern and Appalachian states. This map likely minimizes the extent of the belt, as in southern state counties with large black populations there was a high black turnout and Obama got a higher percent of the black vote.

counties more Republican in 2008
(image from http://nytimes.com/)

On the other side of the coin is Indiana which swung +21% in Obama’s favor–the biggest surprise of the election this year. It looks like Indiana is finally giving up its claim to be the northern-most Southern state and is rejoining the Midwest.

Andy Rooney’s world

Sunday, October 26th, 2008

On 60 Minutes today, Andy Rooney talked about unemployment. Mr. Rooney heard that 10 million Americans are unemployed. Andy refuses to believe this–I guess his friends’ kids are working and his powers of observation don’t extend any further than that. He’s the Inspector Clouseau of commentary.

If many people *are* unemployed, Mr. Rooney knows why–people these days won’t work hard. Why, he worked in a paper mill (for a few months when in college) for $0.45/hour. Convert that from 1939 dollars to 2008 dollars and we have $7.08/hr, higher than today’s minimum wage of $6.55/hr. Of course today’s workers have more taken out for Social Security and Medicaid. In 1939 there was no Medicaid and the SS tax was 2% while today they are 15.3% combined, so today’s single worker takes home $5.97. Mr. Rooney’s short term college job is looking pretty good.

Andy Rooney is as out of touch as John McCain, who said in the Republican primary that American workers won’t take jobs picking lettuce for $50/hour, a whole collection of wrong ideas.

Pepper spray antidote

Tuesday, October 14th, 2008

Pepper spray has been around for years now, but there is not commonly available antidote. And we know how the active ingredient, capsaicin acts to active, or hold open, the ion channels that transduce pain signals. In fact, a quick Google shows that capsaicin binds and activates a receptor called the vanilloid receptor subtype 1 (VR1), a member of a group of related receptors called TRP ion channels that are activated by temperature changes.

Capsaicin chemical structure
Capsaicin chemical structure (from Wikipedia)

So an antidote would be an inhibitor of the VR1 receptor, and such a thing should be easy to find, or create, and in fact another Google shows that several have been created. Capsazepine was the first inhibitor discovered, way back in 1994. Activators and inhibitors of this receptor have many potential uses as analgesics and anti-inflammation compounds so there is a lot of research interest.  See also, Discovery and development of TRPV1 antagonists.

Capsazepine
Capsaicin inhibitor capsazepine (from Wikipedia)

A spray containing one of these inhibitors should be an effective antidote for pepper spray. But surprisingly no such inhibitor is available! The small quantities of purified inhibitors are available in small quantities for research purposes (i.e. capsazepine, 50mg for $455 but I can’t find anyone who has made an antidote preparation. This should be safe and fairly easy. Safe, because it would be applied mainly externally, and because pepper spray is itself fairly safe–aside from the pain and shock it is used to cause. It doesn’t have other, non-specific side effects. And relatively easy to make because the literature describes the synthesis of inhibitors from capsaicin itself. So the starting product used to make an inhibitor can be capsaicin, and capsaicin is readily available in large quantities!

Update:
Wikipedia: Discovery and development of TRPV1 antagonists

A synthesis:
The easiest antagonist to make may be norcapsaicin or nornorcapsaicin, basically capsaicin with a shorter alkane tail.  Is is not a great competitive antagonist, but should compete with capsaicin to bind TRPV1.

Norcapsaicin be synthesized from vanillylamine and trans-7-Methyl-5-octenoic acid by reaction with thionyl chloride (SOCl2) to give norcapsaicin.  Vanillylamine can be generated by reaction of capsaicin with lipase B from vanillylamine and trans-7-Methyl-5-octenoic acid by reaction with thionyl chloride (SOCl2) to give norcapsaicin. Vanillylamine can be generated by reaction of capsaicin with lipase B from Candida antarctica (ref).   Trans-7-Methyl-5-octenoic acid can be synthesized from isobutyraldehye (500 ml, $32) in a 3-step reaction:
“Allylic alcohol 2A was produced by treatment of isobutyraldehyde IA with vinyl magesium bromide at room temperature in 73% yield, and was subsequently subjected to the orthoester Claisen rearrangement by heating with triethyl orthoacetate in the presence of a catalytic amount of propionic acid at 138 °C for 3h. (E)-6-Methyl-4-heptenoate 3A, a common precursor of capsaicinoids (C-8 – C-13), was thus obtained exclusively (E/Z> 100 by a capillary GLC analysis) in the 73% isolated yield… Alkaline hydrolysis of ester 3A gave acid 8Aa in 89% yield” (ref).

President Reagan’s cartoon administration

Wednesday, June 4th, 2008

From way back in 1986, Michael Kinsley reviews David A. Stockman’s The Triumph of Politics: How the Reagan Revolution Failed (1986). Stockman was President Reagan’s budget director from 1981-85.

The Reagan stories are priceless.

Cabinet members take skillful advantage of the Commander in Chief’s capacity for befuddlement. Secretary of Transportation Drew Lewis convinces him that quotas on Japanese cars are not a violation of free trade because Government regulations have hampered American producers. (Japanese cars must meet the same regulations, of course.) Secretary of Defense Caspar W. Weinberger shows up for a meeting intended to settle whether the defense buildup should be $1.46 trillion over five years or only $1.33 trillion. His chief prop is a cartoon of three soldiers – one, a pygmy without a rifle, representing the Carter budget; one, ”a four-eyed wimp . . . carrying a tiny rifle,” representing $1.33 trillion, Mr. Stockman’s defense budget; and one, ”G.I. Joe himself . . . all decked out in helmet and flak jacket and pointing an M-60 machine gun,” representing $1.46 trillion. This is how Presidential decisions are made. Mr. Stockman makes clear that Mr. Weinberger himself had absolutely no idea how to spend all this money at the time he argued it was essential to our national security. He would get as much as he could, then go back to the Pentagon and figure out what to do with it.

And this was before the Alzheimer’s disease was noticeable in Reagan’s second term. Government by cartoon. I wonder if this is the budget process they teach in political science classes. A $130 billion dollar cartoon.